[1]

Calil IP, Fontes EPB. 2016. Plant immunity against viruses: antiviral immune receptors in focus. Annals of Botany 119:711−723

doi: 10.1093/aob/mcw200
[2]

Kozieł E, Otulak-Kozieł K, Rusin P. 2024. Glutathione-the "master" antioxidant in the regulation of resistant and susceptible host-plant virus-interaction. Frontiers in Plant Science 15:1373801

doi: 10.3389/fpls.2024.1373801
[3]

Lefeuvre P, Martin DP, Elena SF, Shepherd DN, Roumagnac P, et al. 2019. Evolution and ecology of plant viruses. Nature Reviews Microbiology 17:632−644

doi: 10.1038/s41579-019-0232-3
[4]

Boualem A, Dogimont C, Bendahmane A. 2016. The battle for survival between viruses and their host plants. Current Opinion in Virology 17:32−38

doi: 10.1016/j.coviro.2015.12.001
[5]

Bhattacharjee S, Sengupta A, Ghosh S. 2004. Allium vegetables in cancer prevention: an overview. Asian Pacific Journal of Cancer Prevention 5:237−245

[6]

Wiczkowski W. 2018. Garlic and onion. In Handbook of Vegetables and Vegetable Processing, eds Siddiq M, Uebersax MA. US: John Wiley & Ltd. pp. 661−682 doi: 10.1002/9781119098935.ch28

[7]

van Dijk P. 1994. Virus diseases of Allium species and prospects for their control. Acta Horticulturae 358:299−306

doi: 10.17660/actahortic.1994.358.50
[8]

Melhus IE, Reddy CS, Hsndbeson WJ, Vestal EG. 1929. A new virus disease epidemic onions. Phytopathology 19:73−77

[9]

van Dijk P. 1993. Survey and characterization of potyviruses and their strains of Allium species. Netherlands Journal of Plant Pathology 99(2):1−48

doi: 10.1007/BF02017734
[10]

Shahid MU, Riaz A, Shafique T, Al-zaban MI, Abd El-Moneim D, et al. 2024. Molecular identification and characterization of iris yellow spot virus (IYSV) and garlic virus X (GVX) infecting Allium species. Plant Biotechnology Reports 18(4):507−513

doi: 10.1007/s11816-024-00905-5
[11]

Kopec A, Piatkowska E, Leszczynska T, Sikora E. 2013. Healthy properties of garlic. Current Nutrition & Food Science 9(1):59−64

doi: 10.2174/1573401311309010010
[12]

Marchese A, Barbieri R, Sanches-Silva A, Daglia M, Nabavi SF, et al. 2016. Antifungal and antibacterial activities of allicin: a review. Trends in Food Science & Technology 52:49−56

doi: 10.1016/j.jpgs.2016.03.010
[13]

Zhao XX, Lin FJ, Li H, Li HB, Wu DT, et al. 2021. Recent advances in bioactive compounds, health functions, and safety concerns of onion (Allium cepa L.). Frontiers in Nutrition Volume 8:669805

doi: 10.3389/fnut.2021.669805
[14]

Barg E, Lesemann DE, Vetten HJ, Green SK. 1994. Identification, partial characterization, and distribution of viruses infecting Allium crops in south and Southeast Asia. Acta Horticulturae 358:251−258

doi: 10.17660/actahortic.1994.358.41
[15]

Zhang C, Wu Z, Li Y, Wu J. 2015. Biogenesis, function, and applications of virus-derived small RNAs in plants. Frontiers in Microbiology 6:1237

doi: 10.3389/fmicb.2015.01237
[16]

Gao S, Li F, Zeng Z, He Q, Mostafa HHA, et al. 2025. A single-cell transcriptomic atlas reveals the cell differentiation trajectory and the response to virus invasion in swelling clove of garlic. Horticulture Research 12(4):uhae365

doi: 10.1093/hr/uhae365
[17]

Stace-Smith R, Hamilton RI. 1988. Inoculum thresholds of seedborne pathogens: viruses. Phytopathology 78(6):875−880

doi: 10.1094/phyto-78-875
[18]

Pappu HR, Hellier BC, Dugan FM. 2005. First report of onion yellow dwarf virus, Leek yellow stripe virus, and garlic common latent virus in garlic in Washington State. Plant Disease 89(2):205

doi: 10.1094/pd-89-0205c
[19]

Carr JP, Tungadi T, Donnelly R, Bravo-Cazar A, Rhee SJ, et al. 2020. Modelling and manipulation of aphid-mediated spread of non-persistently transmitted viruses. Virus Research 277:197845

doi: 10.1016/j.virusres.2019.197845
[20]

Santosa A, Ertunç F. 2020. Serological and molecular detection of Leek yellow stripe virus infecting onion (Allium cepa L.) and leek (Allium ampeloprasum L.) in Ankara, Turkey. Bitki Koruma Bülteni 60(1):49−56

doi: 10.16955/bitkorb.622150
[21]

Lunello P, Ducasse D, Conci V. 2005. Improved PCR detection of potyviruses in Allium species. European Journal of Plant Pathology 112(4):371−378

doi: 10.1007/s10658-005-6232-3
[22]

Mansouri F, Krahulec F, Duchoslav M, Ryšánek P. 2021. Newly identified host range of viruses infecting species of the genusAlliumand their distribution in six habitats in the Czech Republic. Plant Pathology 70(6):1496−1507

doi: 10.1111/ppa.13391
[23]

Santosa AI, Nasir MA, Çelik A, Farooq T, Subiastuti AS. 2024. Molecular identification of three potyviruses infecting Allium cepa var. aggregatum and Allium sativum in central cultivation areas of Indonesia. Caraka Tani: Journal of Sustainable Agriculture 39(2):359

doi: 10.20961/carakatani.v39i2.86146
[24]

Taher K, Snihur H, Shevchenko T, Budzanivska I, Shevchenko O. 2024. First report of garlic common latent virus and shallot latent virus in Allium crops in Ukraine. Journal of Plant Pathology 106(4):1883−1884

doi: 10.1007/s42161-024-01722-z
[25]

Sharma S, Cramer CS. 2023. Reduced Iris yellow spot symptom expression in the selected onion germplasm. Vegetable Research 3:26

doi: 10.48130/VR-2023-0026
[26]

Altieri L, Candido V, Miccolis V, Camele I. 2022. Garlic (Allium spp.) viruses: detection, distribution and remediation attempts in a European garlic collection. Notulae Botanicae Horti Agrobotanici Cluj-Napoca 50(3):12779

doi: 10.15835/nbha50312779
[27]

Anum H, Tong Y, Cheng R. 2024. Different preharvest diseases in garlic and their eco-friendly management strategies. Plants 13(2):267

doi: 10.3390/plants13020267
[28]

Santosa AI, Ertunc F. 2021. Characterization of two Cucumber mosaic virus isolates infecting Allium cepa in Turkey. Phytopathologia Mediterranea 60(1):13−21

doi: 10.36253/phyto-11840
[29]

Güller A, Demirel S, Usta M, Korkmaz G. 2024. Genetic diversity of cucumber mosaic virus in cucumber plants grown in diyarbakır province. Türk Doğa Ve Fen Dergisi 13(1):1−6

doi: 10.46810/tdfd.1266565
[30]

Oliveira ML, Hoffmann MIM, Mituti T, Pavan MA, Krause-Sakate R. 2014. First report of Garlic virus X in garlic plants in Brazil. Plant Disease 98(7):1013

doi: 10.1094/pdis-08-13-0845-pdn
[31]

Fidan H, Baloglu S. 2009. First report of Onion yellow dwarf virus and Leek yellow stripe virus in garlic in Turkey. Plant Disease 93(6):672

doi: 10.1094/pdis-93-6-0672c
[32]

Wu H, Qu X, Dong Z, Luo L, Shao C, et al. 2020. WUSCHEL triggers innate antiviral immunity in plant stem cells. Science 370(6513):227−231

doi: 10.1126/science.abb7360
[33]

Jo Y, Back CG, Kim KH, Chu H, Lee JH, et al. 2021. Using RNA-sequencing data to examine tissue-specific garlic microbiomes. International Journal of Molecular Sciences 22(13):6791

doi: 10.3390/ijms22136791
[34]

Kamenetsky R, Faigenboim A, Shemesh Mayer E, Ben Michael T, Gershberg C, et al. 2015. Integrated transcriptome catalogue and organ-specific profiling of gene expression in fertile garlic (Allium sativum L.). BMC Genomics 16:12

doi: 10.1186/s12864-015-1212-2
[35]

Huchette O, Bellamy C, Filomenko R, Pouleau B, Seddas S, et al. 2008. Iris yellow spot virus on Shallot and Onion in France. Plant Health Progress 9:46

doi: 10.1094/php-2008-0610-01-br
[36]

Gorrepati K, Krishna R, Singh S, Shirsat DV, Soumia PS, et al. 2024. Harnessing the nutraceutical and therapeutic potential of Allium spp.: current insights and future directions. Frontiers in Nutrition 11:1497953

doi: 10.3389/fnut.2024.1497953
[37]

Yang F, Wang H, Zhi C, Chen B, Zheng Y, et al. 2021. Garlic volatile diallyl disulfide induced cucumber resistance to downy mildew. International Journal of Molecular Sciences 22(22):12328

doi: 10.3390/ijms222212328
[38]

Prajapati MR, Singh J, Kumar P, Dixit R. 2023. De novo transcriptome analysis and identification of defensive genes in garlic (Allium sativum L.) using high-throughput sequencing. Journal of Genetic Engineering and Biotechnology 21(1):56

doi: 10.1186/s43141-023-00499-5
[39]

Curtis MD, Rae AL, Rusu AG, Harrison SJ, Manners JM. 1997. A peroxidase gene promoter induced by phytopathogens and methyl jasmonate in transgenic plants. Molecular Plant-Microbe Interactions 10(3):326−338

doi: 10.1094/mpmi.1997.10.3.326
[40]

Yan A, Wu M, Zhao Y, Zhang A, Liu B, et al. 2014. Involvement of C2H2 zinc finger proteins in the regulation of epidermal cell fate determination in Arabidopsis. Journal of Integrative Plant Biology 56:1112−1117

doi: 10.1111/jipb.12221
[41]

Nakashima K, Tran LP, Van Nguyen D, Fujita M, Maruyama K, et al. 2007. Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice. The Plant Journal 51(4):617−630

doi: 10.1111/j.1365-313x.2007.03168.x
[42]

Mehra R, Jasrotia RS, Mahajan A, Sharma D, Iquebal MA, et al. 2020. Transcriptome analysis of Snow Mountain Garlic for unraveling the organosulfur metabolic pathway. Genomics 112(1):99−107

doi: 10.1016/j.ygeno.2019.07.014
[43]

Ipek M, Sahin N, Ipek A, Cansev A, Simon PW. 2015. Development and validation of new SSR markers from expressed regions in the garlic genome. Scientia Agricola 72(1):41−46

doi: 10.1590/0103-9016-2014-0138
[44]

Nomura H, Komori T, Uemura S, Kanda Y, Shimotani K, et al. 2012. Chloroplast-mediated activation of plant immune signalling in Arabidopsis. Nature Communications 3:926

doi: 10.1038/ncomms1926
[45]

Ward LI, Perez-Egusquiza Z, Fletcher JD, Clover GRG. 2009. A survey of viral diseases of Allium crops in New Zealand. Australasian Plant Pathology 38:533−539

doi: 10.1071/AP09039
[46]

Lot H, Chovelon V, Souche S, Delecolle B. 1998. Effects of onion yellow dwarf and leek yellow stripe viruses on symptomatology and yield loss of three french garlic cultivars. Plant Disease 82(12):1381−1385

doi: 10.1094/pdis.1998.82.12.1381
[47]

Stapleton JJ, Summers CG. 2002. Reflective mulches for management of aphids and aphid-borne virus diseases in late-season cantaloupe (Cucumis melo L. var. cantalupensis). Crop Protection 21:891−898

doi: 10.1016/s0261-2194(02)00055-8
[48]

Gómez P, Rodríguez-Hernández AM, Moury B, Aranda MA. 2009. Genetic resistance for the sustainable control of plant virus diseases: breeding, mechanisms and durability. European Journal of Plant Pathology 125(1):1−22

doi: 10.1007/s10658-009-9468-5
[49]

Conci VC, Canavelli A, Lunello P, Di Rienzo J, Nome SF, et al. 2003. Yield losses associated with virus-infected garlic plants during five successive years. Plant Disease 87(12):1411−1415

doi: 10.1094/pdis.2003.87.12.1411
[50]

Killiny N, Nehela Y, Hajeri S, Gowda S, Stelinski LL. 2025. Virus-induced gene silencing simultaneously exploits 'attract and kill' traits in plants and insects to manage huanglongbing. Horticulture Research 12(2):uhae311

doi: 10.1093/hr/uhae311