[1]

Wang L, Yang B, Bai Y, Lu X, Corlett RT, et al. 2021. Conservation planning on China's borders with Myanmar, Laos, and Vietnam. Conservation Biology 35:1797−1808

doi: 10.1111/cobi.13733
[2]

Dudgeon D. 2000. The ecology of tropical Asian rivers and streams in relation to biodiversity conservation. Annual Review of Ecology and Systematics 31:239−263

doi: 10.1146/annurev.ecolsys.31.1.239
[3]

Kang B, Huang X. 2022. Mekong fishes: biogeography, migration, resources, threats, and conservation. Reviews in Fisheries Science & Aquaculture 30:170−194

doi: 10.1080/23308249.2021.1906843
[4]

Lopes-Lima M, Burlakova LE, Karatayev AY, Mehler K, Seddon M, et al. 2018. Conservation of freshwater bivalves at the global scale: diversity, threats and research needs. Hydrobiologia 810:1−14

doi: 10.1007/s10750-017-3486-7
[5]

Bolotov IN, Sonowal J, Kardong D, Pasupuleti R, Subba Rao NV, et al. 2024. Discovery of an endemism hotspot of freshwater mussels (Bivalvia: Unionidae) in Assam, with a description of two new genera. Zoological Journal of the Linnean Society 202:zlae052

doi: 10.1093/zoolinnean/zlae052
[6]

Simpson CT. 1914. A Descriptive Catalogue of the Naiades, or Pearly Fresh-Water Mussels. Detroit, MI: Bryant Walker. doi: 10.5962/bhl.title.10910
[7]

Simpson CT. 1900. Synopsis of the Naiades, or pearly fresh-water mussels. Proceedings of the United States National Museum 22:501−1044

doi: 10.5479/si.00963801.22-1205.501
[8]

Haas F. 1914. Die Unioniden. Neubearbeitung und Fortsetzung der Küsterschen und Clessinschen Monographien von Unio und Anodonta [The Unionids − a new revision and continuation of Küster's and Clessin's monographs on Unio and Anodonta]. In Systematisches Conchylien-Cabinet von Martini und Chemnitz [Systematic Conchological Cabinet of Martini and Chemnitz], Vol. 9. Nuremberg: Bauer und Raspe. pp. 250−256 doi: 10.5962/bhl.title.50504 (in German)
[9]

Haas F. 1969. Superfamilia Unionacea [Superfamily Unionacea]. In Das Tierreich [The Animal Kingdom], Vol. 88. Berlin: Walter de Gruyter. pp. 1−663 doi: 10.1515/9783111721569
[10]

Brandt RAM. 1974. The non-marine aquatic Mollusca of Thailand. Archiv für Molluskenkunde 105:1−423
[11]

Pfeiffer JM, Graf DL, Cummings KS, Page LM. 2018. Molecular phylogeny and taxonomic revision of two enigmatic freshwater mussel genera (Bivalvia: Unionidae incertae sedis: Harmandia and Unionetta) reveals a diverse clade of Southeast Asian Parreysiinae. Journal of Molluscan Studies 84:404−416

doi: 10.1093/mollus/eyy028
[12]

Bolotov IN, Konopleva ES, Chan N, Lunn Z, Win T, et al. 2022. A riverine biodiversity hotspot in northern Myanmar supports three new and narrowly endemic freshwater mussel species. Aquatic Conservation: Marine and Freshwater Ecosystems 32:1490−1508

doi: 10.1002/aqc.3850
[13]

Ning P, Ding H, Zhang Q. 2023. Two new records of genera and species for freshwater mussels (Bivalvia: Unionoida: Unionoidae) in China. Tropical Agricultural Engineering 47:134−139
[14]

Chen ZG, Dai YT, Zheng H, Ouyang S, Wu XP. 2026. Unionetta xishuangbannaensis n. sp. is the only representative of Parreysiinae Henderson, 1935 (Bivalvia: Unionidae) in China: evidence from molecular phylogeny and morphology. Cathaica 2:53−61

doi: 10.5281/zenodo.19975476
[15]

Xiang HQ, He YM, Guo G. 2026. A new genus of Parreysiinae Henderson, 1935 from Yunnan, China (Bivalvia: Unionidae). Cathaica 2:69−72

doi: 10.5281/zenodo.20696459
[16]

Carter JK, Kimball RT, Funk ER, Kane NC, Schield DR, et al. 2023. Estimating phylogenies from genomes: a beginners review of commonly used genomic data in vertebrate phylogenomics. Journal of Heredity 114:1−13

doi: 10.1093/jhered/esac061
[17]

Combrink LL, Golcher-Benavides J, Lewanski AL, Rick JA, Rosenthal WC, et al. 2025. Population genomics of adaptive radiation. Molecular Ecology 34:e17574

doi: 10.1111/mec.17574
[18]

Lou RN, Jacobs A, Wilder AP, Therkildsen NO. 2021. A beginner's guide to low-coverage whole genome sequencing for population genomics. Molecular Ecology 30:5966−5993

doi: 10.1111/mec.16077
[19]

Trevisan B, Alcantara DMC, Machado DJ, Marques FPL, Lahr DJG. 2019. Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies. PeerJ 7:e7543

doi: 10.7717/peerj.7543
[20]

Huang XC, Wu CHZ, Bolotov IN, Chen ZG, Dai YT, et al. 2025. A novel freshwater‐adapted genus revealed: integrative taxonomy and biogeography of freshwater razor clams (Bivalvia: Pharidae) in East Asia. Zoologica Scripta 54:509−525

doi: 10.1111/zsc.12721
[21]

Dodsworth S. 2015. Genome skimming for next-generation biodiversity analysis. Trends in Plant Science 20:525−527

doi: 10.1016/j.tplants.2015.06.012
[22]

Vargas OM, Heuertz M, Smith SA, Dick CW. 2019. Target sequence capture in the Brazil nut family (Lecythidaceae): marker selection and in silico capture from genome skimming data. Molecular Phylogenetics and Evolution 135:98−104

doi: 10.1016/j.ympev.2019.02.020
[23]

Yu X, Tang Z, Zhang Z, Song Y, He H, et al. 2026. GeneMiner2: accurate and automated recovery of genes from genome skimming data. Molecular Ecology Resources 26:e70111

doi: 10.1111/1755-0998.70111
[24]

Shang HY, Jia KH, Li NW, Zhou MJ, Yang H, et al. 2025. Phytop: a tool for visualizing and recognizing signals of incomplete lineage sorting and hybridization using species trees output from ASTRAL. Horticulture Research 12:uhae330

doi: 10.1093/hr/uhae330
[25]

Gomes-Dos-Santos A, Froufe E, Pfeiffer JM, Johnson NA, Smith CH, et al. 2023. A novel assembly pipeline and functional annotations for targeted sequencing: a case study on the globally threatened Margaritiferidae (Bivalvia: Unionida). Molecular Ecology Resources 23:1403−1422

doi: 10.1111/1755-0998.13802
[26]

Graf DL, Cummings KS. 2026. The MUSSEL Project database: the freshwater mussels (Unionida) of the world (and other less consequential bivalves). www.mussel-project.net (accessed 2026/07/28)
[27]

Chen S, Zhou Y, Chen Y, Gu J. 2018. fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 34:i884−i890

doi: 10.1093/bioinformatics/bty560
[28]

Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, et al. 2017. GeSeq–versatile and accurate annotation of organelle genomes. Nucleic Acids Research 45:W6−W11

doi: 10.1093/nar/gkx391
[29]

Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647−1649

doi: 10.1093/bioinformatics/bts199
[30]

Laslett D, Canbäck B. 2008. ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics 24:172−175

doi: 10.1093/bioinformatics/btm573
[31]

Pfeiffer JM, Breinholt JW, Page LM. 2019. Unioverse: a phylogenomic resource for reconstructing the evolution of freshwater mussels (Bivalvia, Unionoida). Molecular Phylogenetics and Evolution 137:114−126

doi: 10.1016/j.ympev.2019.02.016
[32]

Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30:772−780

doi: 10.1093/molbev/mst010
[33]

Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T. 2009. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25:1972−1973

doi: 10.1093/bioinformatics/btp348
[34]

Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32:1792−1797

doi: 10.1093/nar/gkh340
[35]

Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35:1547−1549

doi: 10.1093/molbev/msy096
[36]

Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17:540−552

doi: 10.1093/oxfordjournals.molbev.a026334
[37]

Zhang D, Gao F, Jakovlić I, Zou H, Zhang J, et al. 2020. PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Molecular Ecology Resources 20:348−355

doi: 10.1111/1755-0998.13096
[38]

Zhang J, Kapli P, Pavlidis P, Stamatakis A. 2013. A general species delimitation method with applications to phylogenetic placements. Bioinformatics 29:2869−2876

doi: 10.1093/bioinformatics/btt499
[39]

Clement M, Posada D, Crandall KA. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9:1657−1659

doi: 10.1046/j.1365-294x.2000.01020.x
[40]

Puillandre N, Lambert A, Brouillet S, Achaz G. 2012. ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Molecular Ecology 21:1864−1877

doi: 10.1111/j.1365-294X.2011.05239.x
[41]

Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution 34:772−773

doi: 10.1093/molbev/msw260
[42]

Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688−2690

doi: 10.1093/bioinformatics/btl446
[43]

Swofford DL. 2003. PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. https://paup.phylosolutions.com/
[44]

Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, et al. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61:539−542

doi: 10.1093/sysbio/sys029
[45]

Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, et al. 2020. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Molecular Biology and Evolution 37:1530−1534

doi: 10.1093/molbev/msaa015
[46]

Price MN, Dehal PS, Arkin AP. 2009. FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Molecular Biology and Evolution 26:1641−1650

doi: 10.1093/molbev/msp077
[47]

Zhang C, Rabiee M, Sayyari E, Mirarab S. 2018. ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees. BMC Bioinformatics 19:153

doi: 10.1186/s12859-018-2129-y
[48]

Morlet L. 1891. Contributions à la Faune malacologique de l'Indo-Chine [Contributions to the malacological fauna of Indochina]. Journal de Conchyliologie [Journal of Conchology] 39:230−254 (in French)
[49]

Lemmon AR, Emme SA, Lemmon EM. 2012. Anchored hybrid enrichment for massively high-throughput phylogenomics. Systematic Biology 61:727−744

doi: 10.1093/sysbio/sys049
[50]

Breinholt JW, Earl C, Lemmon AR, Lemmon EM, Xiao L, et al. 2018. Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for anchored phylogenomics. Systematic Biology 67:78−93

doi: 10.1093/sysbio/syx048
[51]

Ma X, Jin W, Chen W, Liu Q, Jiang H, et al. 2024. Chromosome-level genome assembly of the freshwater mussel Sinosolenaia oleivora (Heude, 1877). Scientific Data 11:606

doi: 10.1038/s41597-024-03451-5
[52]

Degnan JH, Rosenberg NA. 2009. Gene tree discordance, phylogenetic inference and the multispecies coalescent. Trends in Ecology & Evolution 24:332−340

doi: 10.1016/j.tree.2009.01.009
[53]

Konopleva ES, Bolotov IN, Vikhrev IV, Inkhavilay K, Gofarov MY, et al. 2023. A freshwater mussel species reflects a Miocene stream capture between the Mekong Basin and East Asian rivers. Zoosystematics and Evolution 99:29−43

doi: 10.3897/zse.99.90784
[54]

Jeratthitikul E, Sutcharit C, Ngor PB, Prasankok P. 2021. Molecular phylogeny reveals a new genus of freshwater mussels from the Mekong River Basin (Bivalvia: Unionidae). European Journal of Taxonomy 775:119−142

doi: 10.5852/ejt.2021.775.1553
[55]

Pfeiffer JM, Graf DL, Cummings KS, Page LM. 2021. Taxonomic revision of a radiation of South-east Asian freshwater mussels (Unionidae: Gonideinae: Contradentini+Rectidentini). Invertebrate Systematics 35:394−470

doi: 10.1071/IS20044
[56]

Bolotov IN, Pasupuleti R, Subba Rao NV, Unnikrishnan SK, Chan N, et al. 2022. Oriental freshwater mussels arose in East Gondwana and arrived to Asia on the Indian Plate and Burma Terrane. Scientific Reports 12:1518

doi: 10.1038/s41598-022-05257-0